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QuickView for HDAC4 (gene)


Gene Symbol:
HDAC4 Homo sapiens Homo sapiens
Full name:
histone deacetylase 4
Synonyms:
AHO3, BDMR, HA6116, HD4, HDAC-4, HDAC-A, HDACA, histone deacetylase 4, histone deacetylase A
Genomic Location:
Chr 2: 239634801-239987580
Description:
Histones play a critical role in transcriptional regulation, cell cycle progression, and developmental events. Histone acetylation/deacetylation alters chromosome structure and affects transcription factor access to DNA. The protein encoded by this gene belongs to class II of the histone deacetylase/acuc/apha family. It possesses histone deacetylas...
Orthologs:
Mus musculus Rattus norvegicus D. melanogaster Gallus gallus Pan troglodytes Bos taurus Danio rerio Canis lupus familiaris
External Links:
Entrez Gene
Transcription Factor
Binding Sites:
TGGAAA_NFAT_Q4_01 IRF1_01 TTTGCAC_MIR19A_MIR19B TTTGCAG_MIR518A2 HOXA4_Q2 YTATTTTNR_MEF2_02 AGCACTT_MIR93_MIR302A_MIR302B_MIR302C_MIR302D_MIR372_MIR373_MIR520E_MIR520A_MIR526B_MIR520B_MIR520C_MIR520D LXR_DR4_Q3 TTTGTAG_MIR520D CEBP_Q2_01
miRNA binding sites
(Source: TargetScan):
Predicted Gene Targets for miR-1 Predicted Gene Targets for miR-10 Predicted Gene Targets for miR-122a Predicted Gene Targets for miR-138 Predicted Gene Targets for miR-142-5p Predicted Gene Targets for miR-19 Predicted Gene Targets for miR-20 Predicted Gene Targets for miR-141 Predicted Gene Targets for miR-200b Predicted Gene Targets for miR-205
miRNA binding sites
(Source: miRecords):
Cytogenetic Map:
chr 2
2q37.3





GO Molecular Function

sequence-specific DNA binding | kinase binding | transcription regulatory region DNA binding | cation binding | repressing transcription factor binding | protein kinase binding | histone deacetylase activity (H3-K14 specific) | proximal promoter sequence-specific DNA binding | enzyme binding | nucleic acid binding | NAD-dependent histone deacetylase activity (H3-K14 specific) | hydrolase activity | potassium ion binding | protein deacetylase activity | catalytic activity | chromatin binding | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds | ubiquitin-like protein transferase activity | NAD-dependent protein deacetylase activity | histone deacetylase activity | RNA polymerase II regulatory region DNA binding | DNA binding | sequence-specific double-stranded DNA binding | transcription corepressor activity | promoter-specific chromatin binding | identical protein binding | ion binding | organic cyclic compound binding | NAD-dependent histone deacetylase activity | transcription regulatory region sequence-specific DNA binding | protein binding | zinc ion binding | RNA polymerase II proximal promoter sequence-specific DNA binding | double-stranded DNA binding | transcription factor binding | RNA polymerase II transcription factor binding | activating transcription factor binding | RNA polymerase II regulatory region sequence-specific DNA binding | transferase activity | transition metal ion binding | deacetylase activity | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides | SUMO transferase activity | histone deacetylase binding | transcription coregulator activity | metal ion binding | heterocyclic compound binding

GO Biological Process

RNA metabolic process | positive regulation of smooth muscle cell proliferation | negative regulation of phosphorylation | regulation of muscle system process | positive regulation of macromolecule biosynthetic process | positive regulation of locomotion | response to cytokine | response to interleukin-1 | positive regulation of cellular component organization | intracellular signal transduction | positive regulation of apoptotic process | regulation of cell development | regulation of localization | positive regulation of DNA-binding transcription factor activity | regulation of carbohydrate metabolic process | regulation of programmed cell death | peptidyl-amino acid modification | response to hormone | negative regulation of cellular process | negative regulation of RNA biosynthetic process | cellular response to tumor necrosis factor | histone modification | cell differentiation | defense response | nervous system development | response to drug | protein sumoylation | histone deacetylation | positive regulation of cellular component movement | B cell differentiation | regulation of neuron death | positive regulation of cellular biosynthetic process | cellular process | regulation of gene expression, epigenetic | lymphocyte differentiation | regulation of cell motility | regulation of glycolytic process | chromatin organization | positive regulation of reactive oxygen species metabolic process | immune system development | negative regulation of nucleic acid-templated transcription | regulation of striated muscle tissue development | osteoblast development | positive regulation of nitrogen compound metabolic process | histone deacetylase activity (H3-K14 specific) | negative regulation of cellular metabolic process | regulation of binding | regulation of cell differentiation | regulation of myotube differentiation | positive regulation of lamellipodium assembly | regulation of cellular process | positive regulation of lamellipodium organization | leukocyte activation | regulation of osteoblast differentiation | regulation of apoptotic process | regulation of skeletal muscle fiber development | regulation of metabolic process | organic cyclic compound metabolic process | positive regulation of cellular protein metabolic process | RNA biosynthetic process | cellular aromatic compound metabolic process | cellular component organization | negative regulation of nucleotide metabolic process | response to muscle inactivity | response to stimulus | cellular response to mechanical stimulus | positive regulation of protein metabolic process | negative regulation of striated muscle cell differentiation | NAD-dependent histone deacetylase activity (H3-K14 specific) | response to stress | cellular nitrogen compound biosynthetic process | regulation of cell proliferation | regulation of cardiac muscle contraction by calcium ion signaling | regulation of blood circulation | regulation of smooth muscle cell migration | cellular nitrogen compound metabolic process | negative regulation of metabolic process | positive regulation of RNA biosynthetic process | hemopoiesis | protein modification process | protein deacetylase activity | cellular biosynthetic process | macromolecule modification | cellular response to parathyroid hormone stimulus | histone H3 deacetylation | regulation of nucleic acid-templated transcription | leukocyte differentiation | negative regulation of osteoblast differentiation | cellular response to hormone stimulus | positive regulation of reactive oxygen species biosynthetic process | regulation of cell projection assembly | regulation of skeletal muscle tissue development | response to inactivity | system development | nitrogen compound metabolic process | negative regulation of phosphate metabolic process | multicellular organism development | negative regulation of ATP metabolic process | NAD-dependent protein deacetylase activity | positive regulation of protein sumoylation | response to denervation involved in regulation of muscle adaptation | positive regulation of smooth muscle cell migration | regulation of muscle contraction | regulation of phosphorylation | regulation of ossification | regulation of gene expression | histone deacetylase activity | positive regulation of cellular metabolic process | regulation of pri-miRNA transcription by RNA polymerase II | regulation of nitrogen compound metabolic process | protein modification by small protein conjugation | regulation of cell migration | positive regulation of cell projection organization | negative regulation of DNA-binding transcription factor activity | transcription corepressor activity | regulation of cellular component movement | regulation of transcription by RNA polymerase II | second-messenger-mediated signaling | positive regulation of cell migration | cellular response to cytokine stimulus | B cell activation | cardiac muscle hypertrophy | biosynthetic process | protein deacetylation | regulation of cellular protein metabolic process | aromatic compound biosynthetic process | positive regulation of neuron death | response to parathyroid hormone | regulation of heart contraction | regulation of protein sumoylation | negative regulation of myotube differentiation | NAD-dependent histone deacetylase activity | regulation of striated muscle contraction | cell communication | regulation of cellular metabolic process | chromatin remodeling | regulation of neuron apoptotic process | inflammatory response | regulation of cardiac muscle contraction | regulation of protein metabolic process | positive regulation of cell proliferation | regulation of locomotion | histone H4 deacetylation | regulation of RNA metabolic process | lymphocyte activation | positive regulation of molecular function | calcium-mediated signaling | negative regulation of carbohydrate metabolic process | protein metabolic process | positive regulation of protein modification process | response to organic substance | response to mechanical stimulus | negative regulation of ossification | regulation of DNA-binding transcription factor activity | positive regulation of neuron apoptotic process | anatomical structure development | metabolic process | regulation of RNA biosynthetic process | negative regulation of transcription, DNA-templated | peptidyl-lysine modification | positive regulation of cell death | negative regulation of glycolytic process | nucleobase-containing compound metabolic process | positive regulation of cellular component biogenesis | organic substance metabolic process | negative regulation of biosynthetic process | negative regulation of gene expression | animal organ development | gene expression | positive regulation of programmed cell death | protein modification by small protein conjugation or removal | regulation of striated muscle cell differentiation | negative regulation of ATP biosynthetic process | regulation of ATP metabolic process | regulation of phosphate metabolic process | transcription, DNA-templated | cell activation | regulation of reactive oxygen species biosynthetic process | negative regulation of molecular function | signaling | covalent chromatin modification | regulation of transcription, DNA-templated | regulation of protein binding | cell development | cellular protein metabolic process | cellular macromolecule biosynthetic process | SUMO transferase activity | positive regulation of plasma membrane bounded cell projection assembly | regulation of developmental process | developmental process | organelle organization | regulation of muscle cell differentiation | peptidyl-lysine deacetylation | cellular protein modification process | negative regulation of transcription by RNA polymerase II | positive regulation of transcription, DNA-templated | regulation of reactive oxygen species metabolic process | negative regulation of cell proliferation | positive regulation of nucleic acid-templated transcription | regulation of lamellipodium assembly | transcription coregulator activity | positive regulation of transcription by RNA polymerase II | heterocycle metabolic process | negative regulation of muscle cell differentiation | regulation of generation of precursor metabolites and energy | positive regulation of metabolic process | chromosome organization | ossification | osteoblast differentiation | regulation of cell projection organization | skeletal system development | immune system process | cellular metabolic process | hematopoietic or lymphoid organ development | response to tumor necrosis factor | cellular response to organic substance | regulation of cell death | regulation of smooth muscle cell proliferation | positive regulation of cell motility | muscle hypertrophy | negative regulation of pri-miRNA transcription by RNA polymerase II | negative regulation of cell differentiation | regulation of cellular component organization | muscle system process | cardiac muscle hypertrophy in response to stress | signal transduction | positive regulation of gene expression | regulation of muscle organ development | macromolecule metabolic process | multicellular organismal process | regulation of phosphorus metabolic process

GO Cellular Component

supramolecular fiber | intracellular membrane-bounded organelle | synapse | catalytic complex | sarcomere | neuromuscular junction | cell | nuclear lumen | A band | myofibril | cytoplasm | intracellular organelle | actin cytoskeleton | contractile fiber | protein-containing complex | histone deacetylase complex | nucleoplasm | actomyosin | membrane-bounded organelle | transcriptional repressor complex | nucleus | organelle | I band | membrane-enclosed lumen | Z disc | cytosol | cytoskeleton | intracellular | supramolecular complex