Correlation Engine 2.0
Clear Search sequence regions
Bookmark Forward Export SNPs

QuickView for SYNCRIP;jsessionid=51EE6853201216CA287B42E5EAA1855D (gene)


Gene Symbol:
SYNCRIP Homo sapiens Homo sapiens
Full name:
synaptotagmin binding cytoplasmic RNA interacting protein
Synonyms:
GRY-RBP, GRYRBP, HNRNPQ, HNRPQ1, NSAP1, PP68, hnRNP-Q, heterogeneous nuclear ribonucleoprotein Q, NS1-associated protein 1, glycine- and tyrosine-rich RNA-binding protein
Genomic Location:
Chr 6: 86380658-86409746
Description:
This gene encodes a member of the cellular heterogeneous nuclear ribonucleoprotein (hnRNP) family. hnRNPs are RNA binding proteins that complex with heterogeneous nuclear RNA (hnRNA) and regulate alternative splicing, polyadenylation, and other aspects of mRNA metabolism and transport. The encoded protein plays a role in multiple aspects of mRNA ma...
Orthologs:
Mus musculus Rattus norvegicus Macaca mulatta Danio rerio Gallus gallus Pan troglodytes Canis lupus familiaris Bos taurus
External Links:
Entrez Gene
Transcription Factor
Binding Sites:
TGGAAA_NFAT_Q4_01 CTTGTAT_MIR381 SP1_01 TFIIA_Q6 PR_02 CEBPA_01 GATA1_01 CREBP1CJUN_01 ATF6_01 ARNT_01
miRNA binding sites
(Source: TargetScan):
Cytogenetic Map:
chr 6
6q14.3





GO Molecular Function

nucleic acid binding | poly(A) binding | single-stranded RNA binding | organic cyclic compound binding | poly-purine tract binding | protein binding | heterocyclic compound binding | RNA binding

GO Biological Process

RNA metabolic process | response to cytokine | RNA processing | RNA stabilization | negative regulation of cellular process | mRNA stabilization | cell differentiation | defense response | cellular process | negative regulation of cellular metabolic process | interspecies interaction between organisms | regulation of mRNA stability | regulation of cellular process | regulation of metabolic process | organic cyclic compound metabolic process | cellular aromatic compound metabolic process | cellular response to interferon-gamma | response to stimulus | RNA splicing | response to stress | RNA splicing, via transesterification reactions | posttranscriptional regulation of gene expression | cellular nitrogen compound metabolic process | negative regulation of metabolic process | mRNA metabolic process | nitrogen compound metabolic process | regulation of gene expression | regulation of nitrogen compound metabolic process | regulation of RNA stability | cellular response to cytokine stimulus | regulation of cellular protein metabolic process | regulation of cellular metabolic process | regulation of protein metabolic process | regulation of RNA metabolic process | viral process | negative regulation of mRNA catabolic process | response to organic substance | metabolic process | immune response | nucleobase-containing compound metabolic process | organic substance metabolic process | negative regulation of biosynthetic process | negative regulation of gene expression | regulation of mRNA catabolic process | negative regulation of cellular protein metabolic process | gene expression | negative regulation of translation | response to interferon-gamma | negative regulation of protein metabolic process | developmental process | innate immune response | CRD-mediated mRNA stabilization | heterocycle metabolic process | positive regulation of metabolic process | ossification | osteoblast differentiation | immune system process | cellular metabolic process | mRNA processing | cellular response to organic substance | regulation of translation | mRNA splicing, via spliceosome | positive regulation of gene expression | macromolecule metabolic process | multicellular organismal process

GO Cellular Component

GAIT complex | intracellular membrane-bounded organelle | catalytic complex | catalytic step 2 spliceosome | CRD-mediated mRNA stability complex | cell | nuclear lumen | cytoplasm | intracellular organelle | endoplasmic reticulum | protein-containing complex | endomembrane system | nucleoplasm | ribonucleoprotein complex | spliceosomal complex | histone pre-mRNA 3'end processing complex | membrane-bounded organelle | nucleus | organelle | membrane-enclosed lumen | intracellular | membrane