BaseSpace
Correlation
Engine-Public
Sign In
Register
Correlation Engine 2.0
Home
My Data
Bookmarks
Collaborations
Inbox
Import Your Data
QuickView
FAQ
What is QuickView?
What can my QuickView results tell me?
What are the sources for the General Info tab in QuickView?
More QuickView FAQs
Back to top
QuickView
Curated
Studies
Body
Atlas
Disease
Atlas
Pharmaco
Atlas
Knockdown
Atlas
Genetic
Markers
Pathway
Enrichment
Literature
Clinical
Trials
0
Meta-
Analysis
QuickView
Search sequence regions
(e.g.
TGFB1
,
glucose metabolic process
,
Inflammatory disorder
,
Adipose tissue
,
Lipitor
)
Organisms
Chromosomes
Start
Stop
Homo Sapiens
Mus Musculus
Rattus Norvegicus
C. Elegans
D. Melanogaster
Saccharomyces Cerevisiae
QuickView
Go back to main search
Bookmark
Forward
Export Results
QuickView
for
rs139223504;jsessionid=3DB0135587E8BA5116A676288C75B6B1
(snp)
Summary
General Info
Macaque
-
Human
A
|
G
Chimp
-
Mouse
-
Rat
-
Type:
SNP
Organism:
Homo sapiens
Alleles:
A
|
G
Chromosomal Location:
chr 7
:
56093243 (build 36.3)
Strand:
+
Update Date:
Nov 14 2011
Associated Gene(s):
CCT6A
,
SNORA15
Related URLs:
NCBI dbSNP
Associated Genes
Population
Correlated SNP
CCT6A (exon)
Transcript
CDS Change
Protein
Mutation Class
AA Change
NM_001009186
G543A
NP_001009186
Synonymous
E181E
NM_001762
G678A
NP_001753
Synonymous
E226E
SNORA15 (intergenic)
Transcript
CDS Change
Protein
Mutation Class
AA Change
-
-
-
-
-
Population Frequency
Population
Alleles
Global or other
G
100%
A
0%
SNPs correlated to rs139223504;jsessionid=3DB0135587E8BA5116A676288C75B6B1 for population
Global
African ancestry in Southwest, USA
Chinese in Metropolitan Denver, Colorado
Gujarati Indians in Houston, Texas
Han Chinese in Beijing, China
Japanese in Tokyo, Japan
Luhya in Webuye, Kenya
Maasai in Kinyawa, Kenya
Mexican ancestry in Los Angeles, California
Toscans in Italy
Utah residents with Northern and Western European ancestry
Yoruba in Ibadan, Nigeria
Clear Filter
No correlated SNPs found.
search
→
result
search
→
result
See more about this page
See complete FAQ