Correlation Engine 2.0
Clear Search sequence regions
Bookmark Forward Export SNPs

QuickView for tinman (gene)


Gene Symbol:
NKX2-5 Homo sapiens Homo sapiens
Full name:
NK2 homeobox 5
Synonyms:
CHNG5, CSX, CSX1, HLHS2, NKX2.5, NKX2E, NKX4-1, VSD3, homeobox protein Nkx-2.5, NK2 transcription factor related, locus 5, NKX 2-5, cardiac-specific homeobox 1, homeobox protein CSX, homeobox protein NK-2 homolog E, homeobox protein NKX 2-5, tinman paralog
Genomic Location:
Chr 5: 172591744-172594868
Description:
This gene encodes a homeobox-containing transcription factor. This transcription factor functions in heart formation and development. Mutations in this gene cause atrial septal defect with atrioventricular conduction defect, and also tetralogy of Fallot, which are both heart malformation diseases. Mutations in this gene can also cause congenital hy...
Orthologs:
Mus musculus Rattus norvegicus Macaca mulatta Danio rerio Gallus gallus Pan troglodytes Canis lupus familiaris Bos taurus
External Links:
Entrez Gene
Transcription Factor
Binding Sites:
Cytogenetic Map:
chr 5
5q35.1





GO Molecular Function

sequence-specific DNA binding | transcription factor activity, transcription factor binding | transcription regulatory region DNA binding | RNA polymerase II transcription factor activity, sequence-specific DNA binding | transcription factor activity, RNA polymerase II transcription factor binding | proximal promoter sequence-specific DNA binding | nucleic acid binding | transcriptional activator activity, RNA polymerase II proximal promoter sequence-specific DNA binding | chromatin binding | serum response element binding | RNA polymerase II regulatory region DNA binding | DNA binding | sequence-specific double-stranded DNA binding | identical protein binding | protein heterodimerization activity | organic cyclic compound binding | transcription regulatory region sequence-specific DNA binding | protein binding | transcriptional activator activity, RNA polymerase II transcription factor binding | protein homodimerization activity | RNA polymerase II proximal promoter sequence-specific DNA binding | double-stranded DNA binding | transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific DNA binding | DNA-binding transcription factor activity | transcription factor binding | protein dimerization activity | RNA polymerase II regulatory region sequence-specific DNA binding | transcription factor activity, RNA polymerase II proximal promoter sequence-specific DNA binding | transcription factor activity, RNA polymerase II distal enhancer sequence-specific binding | transcription coregulator activity | heterocyclic compound binding

GO Biological Process

atrioventricular node cell development | RNA metabolic process | transcription by RNA polymerase II | positive regulation of heart contraction | bundle of His development | regulation of muscle system process | ventricular cardiac muscle tissue morphogenesis | transcription factor activity, transcription factor binding | positive regulation of macromolecule biosynthetic process | heart process | positive regulation of blood circulation | actin filament-based process | positive regulation of cellular component organization | pharyngeal system development | regulation of neurogenesis | muscle tissue development | regulation of cell development | regulation of localization | heart trabecula morphogenesis | morphogenesis of an epithelium | regulation of programmed cell death | regulation of sodium ion transport | actin cytoskeleton organization | negative regulation of cellular process | RNA polymerase II transcription factor activity, sequence-specific DNA binding | positive regulation of developmental process | negative regulation of RNA biosynthetic process | regulation of heart growth | regulation of cardiac muscle cell apoptotic process | cell differentiation | striated muscle cell development | nervous system development | left/right pattern formation | organ growth | neurogenesis | generation of neurons | cardiac cell development | mesenchyme development | cardiac atrium morphogenesis | blood vessel morphogenesis | regulation of cardiac muscle cell proliferation | pattern specification process | positive regulation of cellular biosynthetic process | regulation of transcription initiation from RNA polymerase II promoter | cellular process | sarcomere organization | epithelial tube morphogenesis | heart morphogenesis | negative regulation of signaling | developmental growth | atrioventricular node development | determination of left/right symmetry | canonical Wnt signaling pathway | immune system development | negative regulation of nucleic acid-templated transcription | regulation of striated muscle tissue development | negative regulation of apoptotic process | response to growth factor | positive regulation of nitrogen compound metabolic process | transcription factor activity, RNA polymerase II transcription factor binding | regulation of canonical Wnt signaling pathway | negative regulation of cellular metabolic process | tissue development | regulation of cell differentiation | apoptotic process involved in heart morphogenesis | muscle structure development | muscle cell differentiation | ventricular septum morphogenesis | regulation of myotube differentiation | regulation of cellular process | regulation of apoptotic process | regulation of metabolic process | regulation of protein complex assembly | Purkinje myocyte differentiation | heart contraction | ventricular cardiac muscle cell development | organic cyclic compound metabolic process | trabecula morphogenesis | RNA biosynthetic process | epithelium development | cellular aromatic compound metabolic process | cellular component organization | ventricular trabecula myocardium morphogenesis | thyroid gland development | muscle contraction | muscle organ morphogenesis | response to stimulus | cardiac right ventricle morphogenesis | vasculature development | muscle cell development | positive regulation of cardioblast differentiation | negative regulation of striated muscle cell differentiation | determination of heart left/right asymmetry | atrioventricular node cell fate commitment | cellular nitrogen compound biosynthetic process | heart trabecula formation | regulation of cell proliferation | cardiac muscle cell proliferation | tube morphogenesis | regulation of blood circulation | cardiac muscle tissue development | muscle tissue morphogenesis | programmed cell death | supramolecular fiber organization | cardiovascular system development | cardiac ventricle morphogenesis | cellular nitrogen compound metabolic process | Purkinje myocyte development | blood circulation | transcriptional activator activity, RNA polymerase II proximal promoter sequence-specific DNA binding | negative regulation of metabolic process | positive regulation of RNA biosynthetic process | hemopoiesis | cellular component assembly | proepicardium development | cellular biosynthetic process | septum secundum development | embryo development | heart growth | cell-cell signaling | cell surface receptor signaling pathway involved in cell-cell signaling | blood vessel development | regulation of nucleic acid-templated transcription | response to BMP | apoptotic process | organelle assembly | ventricular cardiac myofibril assembly | system development | nitrogen compound metabolic process | regulation of signal transduction | Wnt signaling pathway | multicellular organism development | negative regulation of striated muscle cell apoptotic process | regulation of muscle contraction | spleen development | determination of bilateral symmetry | regulation of neuron differentiation | regulation of gene expression | outflow tract morphogenesis | embryonic heart tube morphogenesis | positive regulation of cellular metabolic process | animal organ morphogenesis | cardiac conduction system development | regulation of nitrogen compound metabolic process | enzyme linked receptor protein signaling pathway | cardiac atrium development | cardiocyte differentiation | positive regulation of protein complex assembly | regulation of transcription by RNA polymerase II | positive regulation of cell differentiation | negative regulation of cardiac muscle cell apoptotic process | cell proliferation | biosynthetic process | cardiac myofibril assembly | aromatic compound biosynthetic process | cardiac muscle cell development | actomyosin structure organization | cardiac septum morphogenesis | heart looping | pulmonary myocardium development | regulation of heart contraction | endocrine system development | negative regulation of myotube differentiation | regulation of striated muscle contraction | regulation of muscle cell apoptotic process | chordate embryonic development | striated muscle tissue development | cardiac muscle tissue morphogenesis | cell communication | regulation of cellular metabolic process | transmembrane receptor protein serine/threonine kinase signaling pathway | cardiac chamber formation | regulation of cardiac muscle contraction | vasculogenesis | heart development | apoptotic process involved in development | positive regulation of cell proliferation | embryo development ending in birth or egg hatching | regulation of RNA metabolic process | regulation of stem cell differentiation | positive regulation of transport | striated muscle contraction | striated muscle cell differentiation | embryonic morphogenesis | cardiac muscle tissue growth | venous blood vessel development | transcriptional activator activity, RNA polymerase II transcription factor binding | cardiac ventricle formation | embryonic organ morphogenesis | ventricular septum development | transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific DNA binding | DNA-binding transcription factor activity | regionalization | cardiac ventricle development | regulation of growth | response to organic substance | gland development | regulation of cardiac muscle tissue development | tissue morphogenesis | ventricular cardiac muscle tissue development | embryonic heart tube development | anatomical structure development | cell surface receptor signaling pathway | positive regulation of neurogenesis | metabolic process | positive regulation of cell development | cell fate commitment | positive regulation of DNA-templated transcription, initiation | regulation of RNA biosynthetic process | negative regulation of transcription, DNA-templated | negative regulation of programmed cell death | embryonic organ development | negative regulation of muscle cell apoptotic process | transcription factor activity, RNA polymerase II proximal promoter sequence-specific DNA binding | nucleobase-containing compound metabolic process | embryonic heart tube left/right pattern formation | atrial cardiac muscle cell differentiation | positive regulation of cellular component biogenesis | organic substance metabolic process | cell death | negative regulation of biosynthetic process | negative regulation of gene expression | animal organ development | positive regulation of ion transport | positive regulation of sodium ion transport | gene expression | myofibril assembly | transcription factor activity, RNA polymerase II distal enhancer sequence-specific binding | regulation of Wnt signaling pathway | regulation of striated muscle cell differentiation | cytoskeleton organization | muscle cell fate commitment | transcription, DNA-templated | positive regulation of stem cell differentiation | atrial septum development | anatomical structure formation involved in morphogenesis | cardiac muscle cell differentiation | BMP signaling pathway | regulation of cell communication | muscle cell proliferation | negative regulation of signal transduction | signaling | regulation of transcription, DNA-templated | cell development | regulation of developmental growth | anatomical structure morphogenesis | cellular macromolecule biosynthetic process | regulation of DNA-templated transcription, initiation | regulation of organ growth | regulation of nervous system development | regulation of developmental process | regulation of ion transport | developmental process | negative regulation of canonical Wnt signaling pathway | organelle organization | regulation of muscle cell differentiation | regulation of cardiac conduction | cardiac septum development | negative regulation of transcription by RNA polymerase II | tube development | regulation of transport | positive regulation of transcription, DNA-templated | atrial septum morphogenesis | positive regulation of nucleic acid-templated transcription | positive regulation of transcription via serum response element binding | ventricular cardiac muscle cell differentiation | transcription coregulator activity | positive regulation of transcription by RNA polymerase II | cardiac chamber development | heterocycle metabolic process | negative regulation of muscle cell differentiation | positive regulation of metabolic process | negative regulation of Wnt signaling pathway | positive regulation of neuron differentiation | cellular response to BMP stimulus | apoptotic process involved in morphogenesis | cardiac muscle contraction | regulation of cardioblast differentiation | immune system process | cellular metabolic process | hematopoietic or lymphoid organ development | cellular response to organic substance | adult heart development | regulation of cell death | right ventricular cardiac muscle tissue morphogenesis | negative regulation of cell death | circulatory system development | negative regulation of cell differentiation | regulation of cellular component organization | positive regulation of transcription initiation from RNA polymerase II promoter | muscle organ development | muscle system process | atrial cardiac muscle cell development | signal transduction | regulation of signaling | positive regulation of gene expression | outflow tract septum morphogenesis | cellular response to growth factor stimulus | regulation of muscle organ development | macromolecule metabolic process | multicellular organismal process | cardiac muscle cell fate commitment

GO Cellular Component

nuclear transcription factor complex | intracellular membrane-bounded organelle | RNA polymerase II transcription factor complex | cell | transcription factor complex | cytoplasm | intracellular organelle | protein-containing complex | protein-DNA complex | membrane-bounded organelle | nucleus | organelle | intracellular