Optimization of peptidyl allyl sulfones as clan CA cysteine protease inhibitors.

Brandon D Fennell, Julia M Warren, Kevin K Chung, Hannah L Main, Andrew B Arend, Anna Tochowicz, Marion G Götz

Department of Chemistry, Whitman College, WA 99362, USA.

Journal of enzyme inhibition and medicinal chemistry 2013 Jun

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This research investigates the synthesis and inhibitory potency of a series of novel dipeptidyl allyl sulfones as clan CA cysteine protease inhibitors. The structure of the inhibitors consists of a R(1)-Phe-R(2)-AS-Ph scaffold (AS = allyl sulfone). R(1) was varied with benzyloxycarbonyl, morpholinocarbonyl, or N-methylpiperazinocarbonyl substituents. R(2) was varied with either Phe of Hfe residues. Synthesis involved preparation of vinyl sulfone analogues followed by isomerization to allyl sulfones using n-butyl lithium and t-butyl hydroperoxide. Sterics, temperature and base strength were all factors that affected the formation and stereochemistry of the allyl sulfone moiety. The inhibitors were assayed with three clan CA cysteine proteases (cruzain, cathepsin B and calpain I) as well as one serine protease (trypsin). The most potent inhibitor, (E)-Mu-Phe-Hfe-AS-Ph, displayed at least 10-fold selectivity for cruzain over clan CA cysteine proteases cathepsin B and calpain I with a (kobs)/[I] of 6080 ± 1390 M(-1)s(-1).

Citation

Brandon D Fennell, Julia M Warren, Kevin K Chung, Hannah L Main, Andrew B Arend, Anna Tochowicz, Marion G Götz. Optimization of peptidyl allyl sulfones as clan CA cysteine protease inhibitors. Journal of enzyme inhibition and medicinal chemistry. 2013 Jun;28(3):468-78