Comparative analysis of putative orthologues of mitochondrial import motor subunit: Pam18 and Pam16 in plants.

Xuejin Chen, Bushra Ghazanfar, Abdul Rehman Khan, Sikandar Hayat, Zhihui Cheng

PloS one 2013

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Pam18/Tim14 and Pam16/Tim16, highly conserved proteins among eukaryotes, are two essential subunits of protein import motors localized in the inner mitochondrial membrane. The heterodimer formed by Pam18 and Pam16 via their J-type domains serves a regulatory function in protein translocation. Here, we report that thirty-one Pam18 and twenty-six Pam16 putative orthologues in twelve plant species were identified and analyzed through bioinformatics strategy. Results data revealed that Pam18 and Pam16 were also highly conserved among plants including their J-type domains within the hydrophilic region. Key amino acid residues and an HPD motif of Pam18 were identical among the orthologues except OsPam18L5. N-myristoylation sites of Pam18 and casein kinase II phosphorylation sites of Pam 16 were more abundant, which might be important functional sites. Some Pam18 and Pam16 proteins contained a transmembrane region at the N-terminal region. Sub-cellular prediction results indicated that many orthologues localized at mitochondria. Gene expression analyses revealed that Pam18 and Pam16 in Arabidopsis might play roles in senescence and abiotic stress responses. Our detailed study provides a better understanding of Pam18 and Pam16 in plant kingdom.

Citation

Xuejin Chen, Bushra Ghazanfar, Abdul Rehman Khan, Sikandar Hayat, Zhihui Cheng. Comparative analysis of putative orthologues of mitochondrial import motor subunit: Pam18 and Pam16 in plants. PloS one. 2013;8(10):e78400