Balasubramanian Chandramouli, Danilo Di Maio, Giordano Mancini, Giuseppe Brancato
Biochimica et biophysica acta 2016 AprIn recent years, engineered biological pores responsive to external stimuli have been fruitfully used for various biotechnological applications. Moreover, the strategy of tethering photo-switchable moieties into biomolecules has provided an unprecedented temporal control of purposely designed nanodevices, as demonstrated, for example, by the light-mediated regulation of the activity of enzymes and biochannels. Inspired by these advancements, we propose here a de novo designed nanodevice featuring the α-hemolysin (αHL) membrane channel purposely functionalized by an artificial "on/off" molecular switch. The switch, which is based on the photo-isomerization of the azobenzene moiety, introduces a smart nano-valve into the natural non-gated pore to confer tunable transport properties. We validated through molecular dynamics simulations and free energy calculations the effective inter-conversion of the engineered αHL pore between two configurations corresponding to an "open" and a "closed" form. The reported switchable translocation of a single-stranded DNA fragment under applied voltage supports the promising capabilities of this nanopore prototype in view of molecular sensing, detection and delivery applications at single-molecule level. Copyright © 2016 Elsevier B.V. All rights reserved
Balasubramanian Chandramouli, Danilo Di Maio, Giordano Mancini, Giuseppe Brancato. Introducing an artificial photo-switch into a biological pore: A model study of an engineered α-hemolysin. Biochimica et biophysica acta. 2016 Apr;1858(4):689-97
PMID: 26744229
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