TranspoScope: interactive visualization of retrotransposon insertions.

Retrotransposition is an important force in shaping the human genome and is involved in prenatal development, disease and aging. Current genome browsers are not optimized for visualizing the experimental evidence for retrotransposon insertions. We have developed a specialized browser to visualize the evidence for retrotransposon insertions for both targeted and whole-genome sequencing data. TranspoScope's source code, as well as installation instructions, are available at https://github.com/FenyoLab/transposcope. © The Author(s) 2020. Published by Oxford University Press. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com.

Citation

Mark Grivainis, Zuojian Tang, David Fenyö. TranspoScope: interactive visualization of retrotransposon insertions. Bioinformatics (Oxford, England). 2020 Jun 01;36(12):3877-3878

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PMID: 32298413

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