PARG has a robust endo-glycohydrolase activity that releases protein-free poly(ADP-ribose) chains.

Yasin Pourfarjam, Samuel Kasson, Linh Tran, Chris Ho, Sookkyung Lim, In-Kwon Kim

Biochemical and biophysical research communications 2020 Jun 30

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Poly(ADP-ribosyl)ation (PARylation) regulates DNA damage response, chromatin structure, and cell-fate. Dynamic regulation of cellular PAR levels is crucial for the maintenance of genomic integrity and excessive cellular PAR activates a PAR-dependent cell death pathway. Thus, PAR serves as a cell-death signal; however, it has been debated how the protein-free PAR is generated. Here, we demonstrate that PAR glycohydrolases (PARGs) from mammals to bacteria have a robust endo-glycohydrolase activity, releasing protein-free PAR chains longer than three ADP-ribose units as early reaction products. Released PAR chains are transient and rapidly degraded to monomeric ADP-ribose, which is consistent with a short half-life of PAR during DNA damage responses. Computational simulations using a tri-ADP-ribose further support that PARG can efficiently bind to internal sites of PAR for the endo-glycosidic cleavage. Our collective results suggest PARG as a key player in producing protein-free PAR during DNA damage signaling and establish bacterial PARG as a useful tool to enrich short PAR chains that emerge as important reagents for biomedical research. Copyright © 2020 Elsevier Inc. All rights reserved.

Citation

Yasin Pourfarjam, Samuel Kasson, Linh Tran, Chris Ho, Sookkyung Lim, In-Kwon Kim. PARG has a robust endo-glycohydrolase activity that releases protein-free poly(ADP-ribose) chains. Biochemical and biophysical research communications. 2020 Jun 30;527(3):818-823