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CONCUR is a standalone tool for codon usage analysis in ribosome profiling experiments. CONCUR uses the aligned reads in BAM format to estimate codon counts at the ribosome E-, P- and A-sites and at flanking positions. CONCUR is written in Perl and is freely available at Supplementary data are available at Bioinformatics online. © The Author(s) 2020. Published by Oxford University Press.


Michaela Frye, Susanne Bornelöv. CONCUR: quick and robust calculation of codon usage from ribosome profiling data. Bioinformatics (Oxford, England). 2021 May 05;37(5):717-719

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PMID: 32866237

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