Meta-Analysis of Gene Polymorphism of Beta-Lactoglobulin Gene in Indian Dairy Cows.

Yogesh C Bangar, C S Patil, Ankit Magotra, A S Yadav

Biochemical genetics 2022 Jun

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The aim of the present paper was to summarize the gene polymorphisms of beta-lactoglobulin (BLG) gene and its effects on milk yield in 1840 genotyped Indian dairy cows reported in 17 published studies. The meta-analysis was undertaken using gene frequencies of individual studies under random effects model, whereas for association analysis of genotypes with milk yield, standardized mean differences (SMDs) along with 95% confidence interval (CI) were obtained under four genetic models such as additive (AA vs. BB), dominant (AA+AB vs. BB), completely over dominant (AA+BB vs. AB) and recessive (AA vs. AB+BB). The heterogeneity index (I2) was used to determine heterogeneity between studies. The results of meta-analysis suggested that the pooled allelic frequency of allele A was subsidiary as 0.29 (95% CI 0.24, 0.33, I2 = 88.54%) in targeted population, and also, it was non-significantly (P > 0.05) different between Bos indicus (0.28) and Bos taurus/cross cows (0.30). Egger's test indicated no risk of publication bias (P > 0.05). The results also revealed that BLG gene variants have non-significant (P > 0.05) association with milk yield under all genetic models. Although positive effects of SMDs under some models were observed, however, they failed to meet statistical significance (P > 0.05) due to high heterogeneity between studies which lead to conclusion of only uncertain influences of SNP genotypes with milk yield. It was concluded that BLG markers may not be beneficial for improving milk yield in Indian dairy cows. However, it is suggested that the revalidation of the present results should be done by using more number of studies. © 2021. The Author(s), under exclusive licence to Springer Science+Business Media, LLC, part of Springer Nature.

Citation

Yogesh C Bangar, C S Patil, Ankit Magotra, A S Yadav. Meta-Analysis of Gene Polymorphism of Beta-Lactoglobulin Gene in Indian Dairy Cows. Biochemical genetics. 2022 Jun;60(3):1039-1048