Yanzhen Han, Jianchang Wang, Shuhong Zhang, Shuopeng Yang, Xiangji Wang, Yanqing Han, Zhixin Shen, Xiangdong Xu
Food microbiology 2022 MayThe representative enteric viruses responsible for global foodborne outbreaks that have become an essential concern for health authorities are Norovirus (NoV) and Hepatitis A virus (HAV). Droplet digital PCR (ddPCR) has recently emerged as an alternative platform for virus quantification due to its high precision, ultra-sensitivity, and lack of a standard curve need. Using a ratio-based probe-mixing strategy, we established a triplex ddPCR method to detect norovirus genogroup I (GI), genogroup II (GII), and HAV in food, drinking water, and faecal samples. The probe concentration, annealing temperature, and annealing/extension time were all tuned in the PCR amplification program. The detection limit for NoV GI, NoV GII, and HAV was 7.5, 5.0, and 5.0 copies/reaction, respectively. Furthermore, the suggested approach was validated on 114 samples, demonstrating greater sensitivity, accuracy, and anti-interference performance features than RT-qPCR. Copyright © 2021 Elsevier Ltd. All rights reserved.
Yanzhen Han, Jianchang Wang, Shuhong Zhang, Shuopeng Yang, Xiangji Wang, Yanqing Han, Zhixin Shen, Xiangdong Xu. Simultaneous quantification of hepatitis A virus and norovirus genogroup I and II by triplex droplet digital PCR. Food microbiology. 2022 May;103:103933
PMID: 35082084
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