Machine learning approach for predicting single cell lag time of Salmonella Enteritidis after heat and chlorine treatment.

The importance of single-cell variability is increasingly prominent with the developments in foodborne pathogens modeling. Traditional predictive microbiology model cannot accurately describe the growth behavior of small numbers of cells due to individual cell heterogeneity. The objective of the present study was to develop predictive models for single cell lag times of Salmonella Enteritidis after heat and chlorine treatment. A time-lapse microscopy method was employed to evaluate the single cell lag time by monitoring cell divisions. Four supervised machine learning algorithms including gradient boosting regression tree (GBRT), artificial neural network (ANN), random forest (RF), and support vector regression (SVR) were applied and compared. Results show that all four machine learning models have good predictive capabilities without an overfitting of the data. The ANN approach demonstrated superior prediction performance over other machine learning models (RMSE: 0.209, MAE: 0.135 and R2: 0.989). Furthermore, the SHapley Additive exPlanation (SHAP) measures were used to capture the influence of each feature on the model output, and results revealed that population lag times and sublethal injury rate have dominant impacts on the single cell lag time. Consequently, the findings generated from this study may be useful in managing the potential food safety risk caused by single cells of foodborne pathogens. Copyright © 2022 Elsevier Ltd. All rights reserved.

Citation

Zijie Lin, Xiaojie Qin, Jing Li, Muhammad Zohaib Aslam, Tianmei Sun, Zhuosi Li, Xiang Wang, Qingli Dong. Machine learning approach for predicting single cell lag time of Salmonella Enteritidis after heat and chlorine treatment. Food research international (Ottawa, Ont.). 2022 Jun;156:111132

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PMID: 35651007

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