Automating the design-build-test-learn cycle towards next-generation bacterial cell factories.

Automation is playing an increasingly significant role in synthetic biology. Groundbreaking technologies, developed over the past 20 years, have enormously accelerated the construction of efficient microbial cell factories. Integrating state-of-the-art tools (e.g. for genome engineering and analytical techniques) into the design-build-test-learn cycle (DBTLc) will shift the metabolic engineering paradigm from an almost artisanal labor towards a fully automated workflow. Here, we provide a perspective on how a fully automated DBTLc could be harnessed to construct the next-generation bacterial cell factories in a fast, high-throughput fashion. Innovative toolsets and approaches that pushed the boundaries in each segment of the cycle are reviewed to this end. We also present the most recent efforts on automation of the DBTLc, which heralds a fully autonomous pipeline for synthetic biology in the near future. Copyright © 2023 The Authors. Published by Elsevier B.V. All rights reserved.

Citation

Nicolás Gurdo, Daniel C Volke, Douglas McCloskey, Pablo Iván Nikel. Automating the design-build-test-learn cycle towards next-generation bacterial cell factories. New biotechnology. 2023 May 25;74:1-15

Mesh Tags

PMID: 36736693

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