High-throughput virtual search of small molecules for controlling the mechanical stability of human CD4.

Protein mechanical stability determines the function of a myriad of proteins, especially proteins from the extracellular matrix. Failure to maintain protein mechanical stability may result in diseases and disorders such as cancer, cardiomyopathies, or muscular dystrophy. Thus, developing mutation-free approaches to enhance and control the mechanical stability of proteins using pharmacology-based methods may have important implications in drug development and discovery. Here, we present the first approach that employs computational high-throughput virtual screening and molecular docking to search for small molecules in chemical libraries that function as mechano-regulators of the stability of human cluster of differentiation 4, receptor of HIV-1. Using single-molecule force spectroscopy, we prove that these small molecules can increase the mechanical stability of CD4D1D2 domains over 4-fold in addition to modifying the mechanical unfolding pathways. Our experiments demonstrate that chemical libraries are a source of mechanoactive molecules and that drug discovery approaches provide the foundation of a new type of molecular function, that is, mechano-regulation, paving the way toward mechanopharmacology. Copyright © 2024 The Authors. Published by Elsevier Inc. All rights reserved.

Citation

Antonio Reifs, Alba Fernandez-Calvo, Borja Alonso-Lerma, Jörg Schönfelder, David Franco, Mariano Ortega-Muñoz, Salvador Casares, Concepcion Jimenez-Lopez, Laura Saa, Aitziber L Cortajarena, David De Sancho, Eider San Sebastian, Raul Perez-Jimenez. High-throughput virtual search of small molecules for controlling the mechanical stability of human CD4. The Journal of biological chemistry. 2024 Apr;300(4):107133

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PMID: 38432632

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