QuickView for CLCA3 (gene)

Gene Symbol:

CLCA3P Homo sapiens

Full name:

chloride channel accessory 3, pseudogene

Synonyms:

CLCA3, chloride channel regulator 3 pseudogene, chloride channel, calcium activated, family member 3

Genomic Location:

Chr 1: 86872547-86893647

Description:

This gene is a transcribed pseudogene belonging to the calcium sensitive chloride conductance protein family. To date, all members of this gene family map to the same site on chromosome 1p31-p22 and share high degrees of homology in size, sequence and predicted structure, but differ significantly in their tissue distributions. This gene contains se...

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This gene is a transcribed pseudogene belonging to the calcium sensitive chloride conductance protein family. To date, all members of this gene family map to the same site on chromosome 1p31-p22 and share high degrees of homology in size, sequence and predicted structure, but differ significantly in their tissue distributions. This gene contains several nonsense codons compared to other family members that render the transcript a candidate for nonsense-mediated mRNA decay (NMD). Therefore, this gene is unlikely to be protein-coding.

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Orthologs:

Mus musculus ,  Macaca mulatta ,  Danio rerio ,  Bos taurus

External Links:

Entrez Gene

Transcription Factor
Binding Sites:

TGGAAA_NFAT_Q4_01 ,  IRF1_01 ,  OCT1_B ,  OCT1_04 ,  OCT1_01 ,  YATGNWAAT_OCT_C ,  OCT_Q6 ,  AACTGGA_MIR145 ,  STAT6_01 ,  OCT1_Q5_01 ,  OCT_C ,  TCTGATA_MIR361 ,  GGATTA_PITX2_Q2 ,  STAT5A_03 ,  CTCTGGA_MIR520A_MIR525 ,  CTTTAAR_UNKNOWN ,  CAGCAGG_MIR370 ,  CART1_01

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miRNA binding sites
(Source: TargetScan):

Predicted Gene Targets for miR-145 ,  Predicted Gene Targets for miR-361 ,  Predicted Gene Targets for miR-370

Cytogenetic Map:

1p22.3

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