Correlation Engine 2.0
Clear Search sequence regions
Bookmark Forward Export SNPs

QuickView for CX3CL1 (gene)


Gene Symbol:
CX3CL1 Homo sapiens Homo sapiens
Full name:
C-X3-C motif chemokine ligand 1
Synonyms:
ABCD-3, C3Xkine, CXC3, CXC3C, NTN, NTT, SCYD1, fractalkine, neurotactin, fractalkine, C-X3-C motif chemokine 1, CX3C membrane-anchored chemokine, chemokine (C-X3-C motif) ligand 1, small inducible cytokine subfamily D (Cys-X3-Cys), member 1 (fractalkine, neurotactin), small inducible cytokine subfamily D (Cys-X3-Cys), member-1, small-inducible cytokine D1
Genomic Location:
Chr 16: 55963915-55976457
Description:
This gene belongs to the CX3C subgroup of chemokines, characterized by the number of amino acids located between the conserved cysteine residues. This is the only member of the CX3C subgroup, which contains three amino acids between cysteine residues, resulting in a Cys-X-X-X-Cys configuration. The encoded protein contains an extended mucin-like st...
Orthologs:
Mus musculus Rattus norvegicus Macaca mulatta Pan troglodytes Canis lupus familiaris Bos taurus
External Links:
Entrez Gene
Transcription Factor
Binding Sites:
miRNA binding sites
(Source: TargetScan):
Cytogenetic Map:
chr 16
16q21


Transcripts Names
NM_002996
NM_001304392
Protein Names
P78423
A0N0N7
O00672



GO Molecular Function

CXCR1 chemokine receptor binding | CX3C chemokine receptor binding | chemokine activity | CCR chemokine receptor binding | protein-containing complex binding | signaling receptor binding | cytokine receptor binding | CXCR chemokine receptor binding | molecular function regulator | interleukin-8 receptor binding | integrin binding | chemokine receptor binding | cell adhesion molecule binding | protein binding | receptor regulator activity | G-protein coupled receptor binding | receptor ligand activity | cytokine activity | chemoattractant activity

GO Biological Process

positive regulation of release of sequestered calcium ion into cytosol | negative regulation of leukocyte activation | positive regulation of smooth muscle cell proliferation | regulation of ERK1 and ERK2 cascade | regulation of supramolecular fiber organization | glial cell proliferation | regulation of extrinsic apoptotic signaling pathway in absence of ligand | positive regulation of macromolecule biosynthetic process | negative regulation of immune system process | macrophage chemotaxis | macrophage migration | response to cytokine | response to interleukin-1 | positive regulation of cellular component organization | cell motility | regulation of neurogenesis | regulation of cellular localization | negative regulation of peptide secretion | autocrine signaling | regulation of cell development | regulation of localization | leukocyte adhesive activation | positive regulation of DNA-binding transcription factor activity | regulation of programmed cell death | regulation of immune system process | neuron cellular homeostasis | negative regulation of neuron death | negative regulation of cellular process | positive regulation of developmental process | cellular response to tumor necrosis factor | cell differentiation | chemokine-mediated signaling pathway | defense response | nervous system development | negative regulation of hippocampal neuron apoptotic process | cellular chemical homeostasis | neurogenesis | positive regulation of cell adhesion | positive regulation of phosphate metabolic process | negative regulation of protein secretion | regulation of organelle organization | generation of neurons | microglial cell proliferation | blood vessel morphogenesis | regulation of neuron death | positive regulation of GTPase activity | positive regulation of cellular biosynthetic process | cellular process | eosinophil chemotaxis | regulation of neuron migration | regulation of cell motility | localization | cellular homeostasis | cell maturation | negative regulation of signaling | chemokine activity | neuron development | negative regulation of microglial cell activation | negative regulation of apoptotic process | negative regulation of secretion | positive regulation of catalytic activity | positive regulation of nitrogen compound metabolic process | negative regulation of cell migration | regulation of neuron projection development | granulocyte chemotaxis | negative regulation of establishment of protein localization | regulation of cell differentiation | anatomical structure homeostasis | negative regulation of apoptotic signaling pathway | negative regulation of cell motility | regulation of angiogenesis | regulation of protein kinase B signaling | regulation of cellular process | leukocyte activation | negative regulation of interleukin-1 production | regulation of apoptotic process | regulation of metabolic process | gliogenesis | negative regulation of cytokine secretion | regulation of cytosolic calcium ion concentration | negative regulation of tumor necrosis factor production | positive regulation of cellular protein metabolic process | negative regulation of interleukin-1 alpha production | cellular component organization | calcium ion homeostasis | cellular response to interferon-gamma | regulation of peptide secretion | regulation of vasculature development | response to stimulus | negative regulation of protein transport | positive regulation of I-kappaB phosphorylation | vasculature development | neutrophil chemotaxis | positive regulation of protein metabolic process | negative regulation of cell adhesion | response to stress | positive regulation of cation transmembrane transport | negative regulation of tumor necrosis factor superfamily cytokine production | regulation of cell proliferation | lymphocyte chemotaxis | positive regulation of actin filament bundle assembly | tube morphogenesis | positive regulation of cell-cell adhesion | cardiovascular system development | response to ischemia | negative regulation of transport | regulation of protein transport | G-protein coupled receptor signaling pathway | positive regulation of RNA biosynthetic process | monocyte chemotaxis | cellular component assembly | regulation of peptide transport | modulation of chemical synaptic transmission | regulation of cell adhesion | cell-cell signaling | cell chemotaxis | positive regulation of cell-matrix adhesion | molecular function regulator | positive chemotaxis | metal ion homeostasis | blood vessel development | leukocyte migration | regulation of nucleic acid-templated transcription | negative regulation of macrophage activation | locomotion | negative regulation of neuron apoptotic process | regulation of calcium ion transport into cytosol | system development | negative regulation of tumor necrosis factor secretion | regulation of signal transduction | positive regulation of organelle organization | negative regulation of secretion by cell | positive regulation of calcium ion transmembrane transport | positive regulation of neuron projection development | regulation of actin cytoskeleton organization | multicellular organism development | cell migration | regulation of MAPK cascade | regulation of actin filament organization | positive regulation of inflammatory response | positive regulation of protein kinase B signaling | regulation of catalytic activity | regulation of phosphorylation | wound healing | regulation of neuron differentiation | regulation of gene expression | regulation of extrinsic apoptotic signaling pathway | negative regulation of cytokine production | positive regulation of cellular metabolic process | positive regulation of protein phosphorylation | cellular ion homeostasis | positive regulation of ion transmembrane transport | positive regulation of cytosolic calcium ion concentration | regulation of nitrogen compound metabolic process | regulation of cell migration | regulation of cell-substrate adhesion | lymphocyte migration | positive regulation of cell projection organization | cytokine-mediated signaling pathway | positive regulation of intracellular signal transduction | regulation of cellular component movement | regulation of transcription by RNA polymerase II | positive regulation of hydrolase activity | positive regulation of cell differentiation | negative regulation of extrinsic apoptotic signaling pathway | regulation of release of sequestered calcium ion into cytosol | neuron remodeling | cellular response to cytokine stimulus | cell proliferation | leukocyte proliferation | regulation of cellular protein metabolic process | negative regulation of cell-substrate adhesion | angiogenesis | regulation of calcium ion transmembrane transport | regulation of GTPase activity | regulation of apoptotic signaling pathway | microglial cell activation | regulation of tumor necrosis factor production | cation homeostasis | regulation of macrophage activation | regulation of interleukin-1 production | cellular cation homeostasis | cell communication | regulation of cellular metabolic process | regulation of neuron apoptotic process | negative regulation of extrinsic apoptotic signaling pathway in absence of ligand | negative regulation of cell activation | inflammatory response | positive regulation of cytoskeleton organization | regulation of protein metabolic process | positive regulation of signal transduction | leukocyte chemotaxis | cellular calcium ion homeostasis | homeostatic process | positive regulation of cell proliferation | regulation of protein phosphorylation | regulation of locomotion | regulation of RNA metabolic process | positive regulation of transport | neuron maturation | positive regulation of molecular function | regulation of cytokine secretion | neuron differentiation | regulation of signaling receptor activity | receptor regulator activity | protein-containing complex assembly | positive regulation of transforming growth factor beta production | regulation of establishment of protein localization | positive regulation of protein modification process | response to organic substance | eosinophil migration | response to wounding | regulation of lipopolysaccharide-mediated signaling pathway | regulation of DNA-binding transcription factor activity | regulation of intracellular signal transduction | anatomical structure development | cell surface receptor signaling pathway | positive regulation of neurogenesis | positive regulation of cell development | positive regulation of supramolecular fiber organization | regulation of RNA biosynthetic process | developmental maturation | negative regulation of programmed cell death | chemical homeostasis | regulation of secretion | cell adhesion | receptor ligand activity | negative regulation of neuron migration | macrophage activation | immune response | positive regulation of cellular component biogenesis | cytokine activity | regulation of sequestering of calcium ion | positive regulation of transforming growth factor beta1 production | chemoattractant activity | positive regulation of calcium-independent cell-cell adhesion | positive regulation of ion transport | positive regulation of cell-substrate adhesion | regulation of cell activation | negative regulation of cellular component movement | positive regulation of NF-kappaB transcription factor activity | regulation of protein secretion | positive regulation of ERK1 and ERK2 cascade | ion homeostasis | regulation of tumor necrosis factor secretion | regulation of phosphate metabolic process | regulation of ion transmembrane transport | cell-cell adhesion | response to interferon-gamma | positive regulation of cytokine production | angiogenesis involved in wound healing | cell activation | positive regulation of MAPK cascade | negative regulation of glutamate receptor signaling pathway | leukocyte migration involved in inflammatory response | anatomical structure formation involved in morphogenesis | regulation of cell communication | negative regulation of signal transduction | integrin activation | signaling | positive regulation of I-kappaB kinase/NF-kappaB signaling | regulation of transcription, DNA-templated | cell development | positive regulation of phosphorylation | regulation of cytokine production | anatomical structure morphogenesis | regulation of actin filament bundle assembly | positive regulation of calcium ion transport into cytosol | regulation of nervous system development | regulation of developmental process | regulation of ion transport | developmental process | cellular response to interleukin-1 | regulation of calcium ion transport | cellular extravasation | tube development | regulation of transport | positive regulation of transcription, DNA-templated | regulation of cell-cell adhesion | innate immune response | positive regulation of nucleic acid-templated transcription | cellular metal ion homeostasis | positive regulation of transcription by RNA polymerase II | regulation of glutamate receptor signaling pathway | positive regulation of metabolic process | regulation of actin filament-based process | regulation of synaptic plasticity | positive regulation of neuron differentiation | regulation of cell projection organization | regulation of microglial cell activation | immune system process | response to tumor necrosis factor | cellular response to organic substance | regulation of protein localization | regulation of cell death | regulation of smooth muscle cell proliferation | negative regulation of cell death | negative regulation of cell development | neutrophil migration | circulatory system development | regulation of inflammatory response | chemotaxis | divalent inorganic cation homeostasis | negative regulation of locomotion | positive regulation of angiogenesis | regulation of I-kappaB kinase/NF-kappaB signaling | negative regulation of cell differentiation | regulation of cellular component organization | positive regulation of calcium ion transport | regulation of cytoskeleton organization | positive regulation of signaling | signal transduction | mononuclear cell migration | regulation of signaling | positive regulation of gene expression | regulation of cell-matrix adhesion | negative regulation of neurogenesis | multicellular organismal process | regulation of phosphorus metabolic process

GO Cellular Component

integral component of membrane | neuron projection | somatodendritic compartment | cell body | cell | neuronal cell body | intrinsic component of membrane | cytoplasm | cell projection | plasma membrane | perinuclear region of cytoplasm | extracellular region | extracellular space | cell periphery | cell surface | intracellular | membrane