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QuickView for KDM2B;jsessionid=6FCB6EB93F9F4C4E6182E92ABB7733EB (gene)


Gene Symbol:
KDM2B Homo sapiens Homo sapiens
Full name:
lysine demethylase 2B
Synonyms:
CXXC2, FBXL10, Fbl10, JHDM1B, PCCX2, lysine-specific demethylase 2B, CXXC-type zinc finger protein 2, F-box and leucine-rich repeat protein 10, F-box protein FBL10, F-box/LRR-repeat protein 10, JEMMA (Jumonji domain, EMSY-interactor, methyltransferase motif) protein, [Histone-H3]-lysine-36 demethylase 1B, jmjC domain-containing histone demethylation protein 1B, jumonji C domain-containing histone demethylase 1B, lysine (K)-specific demethylase 2B, protein-containing CXXC domain 2
Genomic Location:
Chr 12: 120351282-120503272
Description:
This gene encodes a member of the F-box protein family which is characterized by an approximately 40 amino acid motif, the F-box. The F-box proteins constitute one of the four subunits of ubiquitin protein ligase complex called SCFs (SKP1-cullin-F-box), which function in phosphorylation-dependent ubiquitination. The F-box proteins are divided into ...
Orthologs:
Mus musculus Rattus norvegicus Macaca mulatta Gallus gallus Pan troglodytes Canis lupus familiaris Danio rerio Bos taurus
External Links:
Entrez Gene
Transcription Factor
Binding Sites:
miRNA binding sites
(Source: TargetScan):
Cytogenetic Map:
chr 12
12q24.31





GO Molecular Function

sequence-specific DNA binding | transcription regulatory region DNA binding | cation binding | proximal promoter sequence-specific DNA binding | nucleic acid binding | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors | demethylase activity | catalytic activity | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | RNA polymerase II regulatory region DNA binding | DNA binding | sequence-specific double-stranded DNA binding | histone demethylase activity | ion binding | organic cyclic compound binding | transcription regulatory region sequence-specific DNA binding | protein binding | zinc ion binding | RNA polymerase II proximal promoter sequence-specific DNA binding | double-stranded DNA binding | RNA polymerase II regulatory region sequence-specific DNA binding | dioxygenase activity | transition metal ion binding | histone demethylase activity (H3-K36 specific) | metal ion binding | heterocyclic compound binding | oxidoreductase activity | rRNA binding | RNA binding

GO Biological Process

RNA metabolic process | brain development | fourth ventricle development | morphogenesis of an epithelium | regulation of programmed cell death | eye development | negative regulation of neuron death | negative regulation of cellular process | neural tube patterning | positive regulation of developmental process | embryonic camera-type eye morphogenesis | negative regulation of RNA biosynthetic process | histone modification | histone H2A ubiquitination | male gamete generation | nervous system development | pattern specification process | regulation of neuron death | cellular process | midbrain-hindbrain boundary morphogenesis | epithelial tube morphogenesis | chromatin organization | protein demethylation | multicellular organismal reproductive process | negative regulation of nucleic acid-templated transcription | negative regulation of apoptotic process | negative regulation of cellular metabolic process | tissue development | gamete generation | regulation of cellular process | positive regulation of cell growth | regulation of apoptotic process | regulation of metabolic process | third ventricle development | organic cyclic compound metabolic process | RNA biosynthetic process | epithelium development | cellular aromatic compound metabolic process | cellular component organization | ventricular system development | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors | rostrocaudal neural tube patterning | head development | embryonic epithelial tube formation | demethylase activity | cellular nitrogen compound biosynthetic process | regulation of cell proliferation | tube morphogenesis | epithelial tube formation | reproduction | midbrain development | cellular nitrogen compound metabolic process | regulation of stem cell population maintenance | negative regulation of metabolic process | protein modification process | cellular biosynthetic process | embryo development | macromolecule modification | anterior/posterior pattern specification | regulation of nucleic acid-templated transcription | negative regulation of neuron apoptotic process | system development | nitrogen compound metabolic process | reproductive process | protein monoubiquitination | histone H2A monoubiquitination | multicellular organism development | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | telencephalon development | regulation of gene expression | neural tube closure | animal organ morphogenesis | regulation of nitrogen compound metabolic process | protein modification by small protein conjugation | neural tube formation | regulation of transcription by RNA polymerase II | histone demethylase activity | embryonic camera-type eye development | biosynthetic process | neural tube development | aromatic compound biosynthetic process | hindbrain development | lateral ventricle development | sensory organ development | chordate embryonic development | regulation of cellular metabolic process | eye morphogenesis | regulation of neuron apoptotic process | embryo development ending in birth or egg hatching | regulation of RNA metabolic process | embryonic morphogenesis | multicellular organism reproduction | embryonic organ morphogenesis | histone demethylation | protein metabolic process | regionalization | regulation of growth | protein ubiquitination | tissue morphogenesis | anatomical structure development | regulation of neural precursor cell proliferation | metabolic process | regulation of RNA biosynthetic process | oxidation-reduction process | negative regulation of transcription, DNA-templated | negative regulation of programmed cell death | embryonic organ development | morphogenesis of embryonic epithelium | nucleobase-containing compound metabolic process | organic substance metabolic process | negative regulation of biosynthetic process | negative regulation of gene expression | animal organ development | forebrain development | gene expression | dioxygenase activity | protein modification by small protein conjugation or removal | initiation of neural tube closure | transcription, DNA-templated | camera-type eye development | anatomical structure formation involved in morphogenesis | histone ubiquitination | covalent chromatin modification | positive regulation of growth | regulation of transcription, DNA-templated | cellular protein metabolic process | anatomical structure morphogenesis | cellular macromolecule biosynthetic process | camera-type eye morphogenesis | histone lysine demethylation | positive regulation of stem cell population maintenance | regulation of developmental process | developmental process | organelle organization | regulation of cell growth | spermatogenesis | cellular protein modification process | histone monoubiquitination | negative regulation of transcription by RNA polymerase II | tube development | negative regulation of cell proliferation | negative regulation of neural precursor cell proliferation | tube closure | heterocycle metabolic process | histone demethylase activity (H3-K36 specific) | demethylation | tube formation | central nervous system development | chromosome organization | cellular metabolic process | embryonic eye morphogenesis | regulation of cell death | oxidoreductase activity | negative regulation of cell death | histone H3-K36 demethylation | sexual reproduction | regulation of cellular component organization | macromolecule metabolic process | multicellular organismal process | midbrain-hindbrain boundary development

GO Cellular Component

PcG protein complex | intracellular membrane-bounded organelle | cell | nuclear lumen | nucleolus | intracellular organelle | protein-containing complex | nucleoplasm | membrane-bounded organelle | nucleus | organelle | membrane-enclosed lumen | intracellular