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QuickView for LSM6 (gene)


Gene Symbol:
LSM6 Homo sapiens Homo sapiens
Full name:
LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated
Synonyms:
YDR378C, U6 snRNA-associated Sm-like protein LSm6, LSM6 U6 small nuclear RNA and mRNA degradation associated, LSM6 homolog, U6 small nuclear RNA associated, Sm protein F
Genomic Location:
Chr 4: 147316285-147330663
Description:
Sm-like proteins were identified in a variety of organisms based on sequence homology with the Sm protein family (see SNRPD2; MIM 601061). Sm-like proteins contain the Sm sequence motif, which consists of 2 regions separated by a linker of variable length that folds as a loop. The Sm-like proteins are thought to form a stable heteromer present in t...
Orthologs:
Mus musculus Rattus norvegicus D. melanogaster C. elegans Saccharomyces cerevisiae Macaca mulatta Schizosaccharomyces pombe Danio rerio Gallus gallus Canis lupus familiaris Bos taurus
External Links:
Entrez Gene
Transcription Factor
Binding Sites:
Cytogenetic Map:
chr 4
4q31.22





GO Molecular Function

nucleic acid binding | organic cyclic compound binding | protein binding | heterocyclic compound binding | RNA binding

GO Biological Process

RNA metabolic process | RNA processing | nuclear-transcribed mRNA catabolic process, exonucleolytic | cellular process | organic substance catabolic process | ribosome biogenesis | regulation of metabolic process | catabolic process | exonucleolytic nuclear-transcribed mRNA catabolic process involved in deadenylation-dependent decay | organic cyclic compound metabolic process | cellular aromatic compound metabolic process | mRNA catabolic process | RNA splicing | RNA splicing, via transesterification reactions | ncRNA processing | cellular nitrogen compound metabolic process | negative regulation of metabolic process | mRNA metabolic process | nuclear-transcribed mRNA catabolic process | nucleobase-containing compound catabolic process | nitrogen compound metabolic process | regulation of gene expression | RNA catabolic process | rRNA metabolic process | aromatic compound catabolic process | tRNA processing | rRNA processing | tRNA metabolic process | cellular macromolecule catabolic process | metabolic process | maturation of SSU-rRNA | nucleobase-containing compound metabolic process | organic substance metabolic process | negative regulation of gene expression | gene expression | ncRNA metabolic process | heterocycle metabolic process | ribosomal small subunit biogenesis | ribonucleoprotein complex biogenesis | cellular metabolic process | mRNA processing | nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay | mRNA splicing, via spliceosome | macromolecule metabolic process

GO Cellular Component

U6 snRNP | intracellular membrane-bounded organelle | small nuclear ribonucleoprotein complex | U4/U6 x U5 tri-snRNP complex | cell | nuclear lumen | spliceosomal snRNP complex | ribonucleoprotein granule | nucleolus | cytoplasm | intracellular organelle | P-body | protein-containing complex | nucleoplasm | ribonucleoprotein complex | spliceosomal complex | membrane-bounded organelle | nucleus | organelle | cytoplasmic ribonucleoprotein granule | membrane-enclosed lumen | cytosol | intracellular | small nucleolar ribonucleoprotein complex