QuickView for PATZ1 (gene)

Gene Symbol:

PATZ1 Homo sapiens

Full name:

POZ/BTB and AT hook containing zinc finger 1

Synonyms:

MAZR, PATZ, RIAZ, ZBTB19, ZNF278, ZSG, dJ400N23, POZ-, AT hook-, and zinc finger-containing protein 1, BTB-POZ domain zinc finger transcription factor, MAZ-related factor, POZ-AT hook-zinc finger protein, protein kinase A RI subunit alpha-associated protein, zinc finger and BTB domain-containing protein 19, zinc finger protein 278, zinc finger sarcoma gene protein

Genomic Location:

Chr 22: 30051790-30072249

Description:

The protein encoded by this gene contains an A-T hook DNA binding motif which usually binds to other DNA binding structures to play an important role in chromatin modeling and transcription regulation. Its Poz domain is thought to function as a site for protein-protein interaction and is required for transcriptional repression, and the zinc-fingers...

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The protein encoded by this gene contains an A-T hook DNA binding motif which usually binds to other DNA binding structures to play an important role in chromatin modeling and transcription regulation. Its Poz domain is thought to function as a site for protein-protein interaction and is required for transcriptional repression, and the zinc-fingers comprise the DNA binding domain. Since the encoded protein has typical features of a transcription factor, it is postulated to be a repressor of gene expression. In small round cell sarcoma, this gene is fused to EWS by a small inversion of 22q, then the hybrid is thought to be translocated (t(1;22)(p36.1;q12). The rearrangement of chromosome 22 involves intron 8 of EWS and exon 1 of this gene creating a chimeric sequence containing the transactivation domain of EWS fused to zinc finger domain of this protein. This is a distinct example of an intra-chromosomal rearrangement of chromosome 22. Four alternatively spliced transcript variants are described for this gene.

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Orthologs:

Mus musculus ,  Rattus norvegicus ,  Macaca mulatta ,  Gallus gallus ,  Pan troglodytes ,  Canis lupus familiaris ,  Bos taurus ,  Danio rerio

External Links:

Entrez Gene

Transcription Factor
Binding Sites:

GABP_B ,  PU1_Q6 ,  OCT1_B ,  DR3_Q4 ,  MZF1_01 ,  OCT1_04 ,  E2F1_Q4_01 ,  YATGNWAAT_OCT_C ,  OCT_Q6 ,  CACGTG_MYC_Q2 ,  CCAGGTT_MIR490 ,  AAANWWTGC_UNKNOWN ,  TACTTGA_MIR26A_MIR26B ,  GTAAACC_MIR2995P ,  AATGGAG_MIR136 ,  CTAWWWATA_RSRFC4_Q2 ,  OCT1_Q5_01 ,  OCT_C ,  E2F1_Q4 ,  CTTTGTA_MIR524 ,  GGGAGGRR_MAZ_Q6 ,  HNF4_01 ,  TATAAA_TATA_01 ,  TCTGATA_MIR361 ,  CACCCBINDINGFACTOR_Q6 ,  YY1_Q6 ,  SP3_Q3 ,  GGGCGGR_SP1_Q6 ,  GGCNRNWCTTYS_UNKNOWN ,  CCCNNGGGAR_OLF1_01 ,  HIF1_Q5 ,  MGGAAGTG_GABP_B ,  ACTGAAA_MIR30A3P_MIR30E3P ,  AGGTGCA_MIR500 ,  AP2_Q3 ,  YCATTAA_UNKNOWN ,  E2F_Q4_01 ,  CAGTCAC_MIR134 ,  TCTCTCC_MIR185 ,  GATGKMRGCG_UNKNOWN ,  YGCGYRCGC_UNKNOWN ,  YY1_02 ,  RGAGGAARY_PU1_Q6 ,  TATA_01 ,  CTTTGT_LEF1_Q2 ,  TBP_01 ,  YRCCAKNNGNCGC_UNKNOWN ,  ZF5_B ,  AACTTT_UNKNOWN ,  TCCCCAC_MIR491 ,  PPAR_DR1_Q2 ,  E2F_Q3_01 ,  HIF1_Q3 ,  ELF1_Q6 ,  AGGAAGC_MIR5163P ,  TCCAGAG_MIR518C ,  STAT5A_02

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Cytogenetic Map:

22q12.2

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