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for
rs8023263;jsessionid=6CC66B8C7C5452450E54F052696B54E3
(snp)
Summary
General Info
Macaque
G
Human
G
|
T
Chimp
G
Mouse
G
Rat
G
Type:
snp
Organism:
Homo sapiens
Alleles:
G
|
T
Chromosomal Location:
chr 15
:
49304889 (build 36.3)
Strand:
+
Flanking Sequence:
CATTTCTAC [
G
|
T
] GGATCttatag
Update Date:
May 23 2008
Validated:
YES
Associated Gene(s):
CYP19A1
Related URLs:
NCBI dbSNP
Associated Genes
Population
Correlated SNP
CYP19A1 (intron)
Transcript
CDS Change
Protein
Mutation Class
AA Change
-
-
-
-
-
Population Frequency
Population
Alleles
Genotypes
African ancestry in Southwest, USA (ASW)
G
80%
T
20%
G/G
66%
G
/T
28%
T/T
6%
Utah residents with Northern and Western European ancestry from the CEPH collection (CEU)
G
43%
T
57%
G/G
20%
G
/T
46%
T/T
35%
Han Chinese in Beijing, China (CHB)
G
39%
T
61%
G/G
13%
G
/T
51%
T/T
36%
Chinese in Metropolitan Denver, Colorado (CHD)
G
49%
T
51%
G/G
26%
G
/T
47%
T/T
27%
Gujarati Indians in Houston, Texas (GIH)
G
60%
T
40%
G/G
38%
G
/T
44%
T/T
18%
Japanese in Tokyo, Japan (JPT)
G
55%
T
45%
G/G
31%
G
/T
47%
T/T
22%
Luhya in Webuye, Kenya (LWK)
G
81%
T
19%
G/G
66%
G
/T
30%
T/T
4%
Mexican ancestry in Los Angeles, California (MEX)
G
59%
T
41%
G/G
34%
G
/T
50%
T/T
16%
Maasai in Kinyawa, Kenya (MKK)
G
64%
T
36%
G/G
41%
G
/T
45%
T/T
14%
Toscans in Italy (TSI)
G
52%
T
48%
G/G
30%
G
/T
44%
T/T
26%
Yoruba in Ibadan, Nigeria (YRI)
G
81%
T
19%
G/G
65%
G
/T
33%
T/T
3%
Global or other
G
59%
T
41%
SNPs correlated to rs8023263;jsessionid=6CC66B8C7C5452450E54F052696B54E3 for population
Global
African ancestry in Southwest, USA
Chinese in Metropolitan Denver, Colorado
Gujarati Indians in Houston, Texas
Han Chinese in Beijing, China
Japanese in Tokyo, Japan
Luhya in Webuye, Kenya
Maasai in Kinyawa, Kenya
Mexican ancestry in Los Angeles, California
Toscans in Italy
Utah residents with Northern and Western European ancestry
Yoruba in Ibadan, Nigeria
Clear Filter
SNP
r
2
Maximum Recombination Rate
Distance (bp)
Genetic Distance (cM)
rs8034835
0.812
0.6616
4933.0
0.0014
rs6493489
0.812
0.6616
3394.0
0.0012
rs4774583
0.753
0.6616
11604.0
0.003
rs3784307
0.753
0.6616
10963.0
0.0029
rs2289105
0.753
0.6616
10089.0
0.0028
rs2304463
0.753
0.6616
9477.0
0.0027
rs4324076
0.689
0.6616
6729.0
0.0016
rs8029120
0.635
1.0375
12663.0
0.0041
rs1065779
0.635
1.0375
12786.0
0.0041
rs1065778
0.606
1.4877
2609.0
0.0017
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