QuickView for Clr6;jsessionid=1DE437CE4774BB195C4958E52A668359;jsessionid=0012480FA5E9AEC749C0943D6BD50D20 (gene)
- Gene Symbol:
- RPD3
Saccharomyces cerevisiae - Full name:
- Histone deacetylase; regulates transcription and silencing
- Synonyms:
- MOF6, REC3, Rpd3, RPD3, RPD3, SDI2, SDS6, YNL330C
- Genomic Location:
- Chr XIV: 18001-19302
- Orthologs:
- Homo sapiens , Mus musculus , Rattus norvegicus , D. melanogaster , C. elegans , Macaca mulatta , Danio rerio , Schizosaccharomyces pombe , Gallus gallus , Bos taurus , Pan troglodytes , Canis lupus familiaris
- External Links:
- Entrez Gene
- Transcription Factor
Binding Sites: -
NFY_Q6 , NFY_C , MAZ_Q6 , SF1_Q6 , NFY_Q6_01 , CTTTGTA_MIR524 , TTTTGAG_MIR373 , GGGAGGRR_MAZ_Q6 , GATTGGY_NFY_Q6_01 , GGGTGGRR_PAX4_03
GO Molecular Function
histone deacetylase activity (H3-K14 specific) | NAD-dependent histone deacetylase activity (H3-K14 specific) | hydrolase activity | protein deacetylase activity | catalytic activity | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds | NAD-dependent protein deacetylase activity | histone deacetylase activity | transcription corepressor activity | NAD-dependent histone deacetylase activity | transcription coactivator activity | deacetylase activity | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides | transcription coregulator activity
GO Biological Process
RNA metabolic process | transcription by RNA polymerase II | nucleus organization | regulation of cell cycle process | positive regulation of macromolecule biosynthetic process | regulation of chromatin silencing at telomere | regulation of meiotic cell cycle | regulation of transcription by RNA polymerase I | regulation of autophagy | negative regulation of cellular process | negative regulation of RNA biosynthetic process | histone modification | negative regulation of chromatin silencing at silent mating-type cassette | histone deacetylation | regulation of DNA replication | regulation of organelle organization | negative regulation of DNA metabolic process | negative regulation of meiotic cell cycle | positive regulation of cellular biosynthetic process | cellular process | regulation of gene expression, epigenetic | localization | chromatin organization | negative regulation of nucleic acid-templated transcription | macromolecule localization | regulation of cell cycle | positive regulation of nitrogen compound metabolic process | histone deacetylase activity (H3-K14 specific) | replicative cell aging | negative regulation of cellular metabolic process | regulation of cellular process | gene silencing | regulation of metabolic process | organic cyclic compound metabolic process | RNA biosynthetic process | cellular aromatic compound metabolic process | cellular component organization | regulation of meiosis I | regulation of DNA recombination | NAD-dependent histone deacetylase activity (H3-K14 specific) | cellular nitrogen compound biosynthetic process | reproduction | cellular localization | regulation of gene silencing | cellular nitrogen compound metabolic process | cell cycle G1/S phase transition | regulation of macroautophagy | negative regulation of metabolic process | positive regulation of RNA biosynthetic process | protein modification process | protein deacetylase activity | cellular biosynthetic process | macromolecule modification | histone H3 deacetylation | regulation of nucleic acid-templated transcription | negative regulation of reciprocal meiotic recombination | nitrogen compound metabolic process | reproductive process | NAD-dependent protein deacetylase activity | negative regulation of meiotic nuclear division | regulation of gene expression | histone deacetylase activity | cell cycle | negative regulation of gene expression, epigenetic | positive regulation of cellular metabolic process | regulation of nitrogen compound metabolic process | regulation of DNA-dependent DNA replication initiation | transcription corepressor activity | negative regulation of chromatin silencing at rDNA | regulation of transcription by RNA polymerase II | positive regulation of gene expression, epigenetic | protein localization to organelle | biosynthetic process | protein deacetylation | aromatic compound biosynthetic process | G2/M transition of mitotic cell cycle | regulation of DNA-dependent DNA replication | transcription elongation from RNA polymerase II promoter | mitotic cell cycle phase transition | negative regulation of transcription by RNA polymerase I | NAD-dependent histone deacetylase activity | protein localization to nucleolar rDNA repeats | regulation of cellular metabolic process | regulation of transcription involved in G1/S transition of mitotic cell cycle | cell cycle G2/M phase transition | G1/S transition of mitotic cell cycle | histone H4 deacetylation | transcription coactivator activity | regulation of RNA metabolic process | regulation of chromatin silencing at silent mating-type cassette | cell aging | negative regulation of gene silencing | protein metabolic process | regulation of transcription involved in G2/M transition of mitotic cell cycle | regulation of meiotic nuclear division | mitotic cell cycle | metabolic process | negative regulation of chromatin silencing | regulation of reciprocal meiotic recombination | regulation of chromatin silencing | negative regulation of transcription involved in meiotic cell cycle | regulation of RNA biosynthetic process | negative regulation of transcription, DNA-templated | cellular protein localization | nucleobase-containing compound metabolic process | transfer RNA gene-mediated silencing | organic substance metabolic process | negative regulation of biosynthetic process | negative regulation of gene expression | gene expression | nucleolus organization | regulation of chromosome organization | positive regulation of autophagy | regulation of chromatin silencing at rDNA | transcription, DNA-templated | positive regulation of macroautophagy | negative regulation of cell cycle | negative regulation of DNA recombination | meiotic cell cycle | negative regulation of chromatin silencing at telomere | negative regulation of chromosome organization | covalent chromatin modification | regulation of transcription, DNA-templated | protein localization | cellular protein metabolic process | cellular macromolecule localization | cellular macromolecule biosynthetic process | developmental process | organelle organization | cellular protein modification process | negative regulation of transcription by RNA polymerase II | positive regulation of transcription, DNA-templated | positive regulation of nucleic acid-templated transcription | cell cycle phase transition | transcription coregulator activity | positive regulation of transcription by RNA polymerase II | heterocycle metabolic process | positive regulation of metabolic process | chromosome organization | chromatin silencing | cellular metabolic process | negative regulation of cell cycle process | regulation of transcription involved in meiotic cell cycle | aging | regulation of cellular component organization | protein localization to chromosome | positive regulation of gene expression | macromolecule metabolic process | DNA-templated transcription, elongation | regulation of chromatin organization
GO Cellular Component
chromosome | intracellular membrane-bounded organelle | catalytic complex | Rpd3L-Expanded complex | Rpd3L complex | cell | nuclear lumen | cytoplasm | intracellular organelle | protein-containing complex | histone deacetylase complex | nucleoplasm | chromatin | nuclear chromosome | Rpd3S complex | membrane-bounded organelle | nucleus | Sin3-type complex | organelle | membrane-enclosed lumen | nuclear chromatin | intracellular | nuclear periphery | Snt2C complex
