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for
rs2304463
(snp)
Summary
General Info
Macaque
C
Human
A
|
C
Chimp
C
Mouse
G
Rat
G
Type:
snp
Organism:
Homo sapiens
Alleles:
A
|
C
Chromosomal Location:
chr 15
:
49295412 (build 36.3)
Strand:
+
Flanking Sequence:
TAATTGAAA [
A
|
C
] CATTGGTGCTT
Update Date:
May 26 2008
Validated:
YES
Associated Gene(s):
CYP19A1
Related URLs:
NCBI dbSNP
Associated Genes
Population
Correlated SNP
CYP19A1 (intron)
Transcript
CDS Change
Protein
Mutation Class
AA Change
-
-
-
-
-
Population Frequency
Population
Alleles
Genotypes
Global or other
A
59%
C
41%
African ancestry in Southwest, USA (ASW)
A
79%
C
21%
A/A
64%
A
/C
30%
C/C
6%
Utah residents with Northern and Western European ancestry from the CEPH collection (CEU)
A
43%
C
57%
A/A
19%
A
/C
48%
C/C
34%
Han Chinese in Beijing, China (CHB)
A
41%
C
60%
A/A
13%
A
/C
55%
C/C
32%
Chinese in Metropolitan Denver, Colorado (CHD)
A
47%
C
54%
A/A
24%
A
/C
46%
C/C
31%
Gujarati Indians in Houston, Texas (GIH)
A
59%
C
41%
A/A
35%
A
/C
48%
C/C
17%
Japanese in Tokyo, Japan (JPT)
A
54%
C
47%
A/A
28%
A
/C
51%
C/C
21%
Luhya in Webuye, Kenya (LWK)
A
81%
C
19%
A/A
67%
A
/C
28%
C/C
6%
Mexican ancestry in Los Angeles, California (MEX)
A
60%
C
40%
A/A
34%
A
/C
52%
C/C
14%
Maasai in Kinyawa, Kenya (MKK)
A
63%
C
37%
A/A
41%
A
/C
44%
C/C
15%
Toscans in Italy (TSI)
A
51%
C
49%
A/A
31%
A
/C
40%
C/C
30%
Yoruba in Ibadan, Nigeria (YRI)
A
85%
C
15%
A/A
72%
A
/C
27%
C/C
2%
SNPs correlated to rs2304463 for population
Global
African ancestry in Southwest, USA
Chinese in Metropolitan Denver, Colorado
Gujarati Indians in Houston, Texas
Han Chinese in Beijing, China
Japanese in Tokyo, Japan
Luhya in Webuye, Kenya
Maasai in Kinyawa, Kenya
Mexican ancestry in Los Angeles, California
Toscans in Italy
Utah residents with Northern and Western European ancestry
Yoruba in Ibadan, Nigeria
Clear Filter
SNP
r
2
Maximum Recombination Rate
Distance (bp)
Genetic Distance (cM)
rs2289105
0.972
0.4086
612.0
1.0E-4
rs8034835
0.893
0.4086
4544.0
0.0013
rs6493489
0.887
0.4086
6083.0
0.0015
rs4774583
0.886
0.4086
2127.0
3.0E-4
rs3784307
0.886
0.4086
1486.0
2.0E-4
rs4324076
0.833
0.4086
2748.0
0.0011
rs8023263
0.753
0.6616
9477.0
0.0027
rs7167936
0.635
4.6128
8575.0
0.0043
rs8029120
0.635
1.0375
3186.0
0.0014
rs10046
0.635
1.0375
5134.0
0.0025
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