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for
rs3784307;jsessionid=9083715B9F2B56868F8C6856137429EC
(snp)
Summary
General Info
Macaque
G
Human
A
|
G
Chimp
G
Mouse
-
Rat
-
Type:
snp
Organism:
Homo sapiens
Alleles:
A
|
G
Chromosomal Location:
chr 15
:
49293926 (build 36.3)
Strand:
+
Flanking Sequence:
GCATCACTG [
A
|
G
] ATTGGAGTGGA
Update Date:
Apr 04 2008
Validated:
YES
Associated Gene(s):
CYP19A1
Related URLs:
NCBI dbSNP
Associated Genes
Population
Correlated SNP
CYP19A1 (intron)
Transcript
CDS Change
Protein
Mutation Class
AA Change
-
-
-
-
-
Population Frequency
Population
Alleles
Genotypes
African ancestry in Southwest, USA (ASW)
G
79%
A
21%
G/G
64%
A
/G
30%
A/A
6%
Utah residents with Northern and Western European ancestry from the CEPH collection (CEU)
G
43%
A
57%
G/G
20%
A
/G
46%
A/A
34%
Han Chinese in Beijing, China (CHB)
G
41%
A
59%
G/G
13%
A
/G
56%
A/A
31%
Chinese in Metropolitan Denver, Colorado (CHD)
G
47%
A
53%
G/G
24%
A
/G
47%
A/A
29%
Gujarati Indians in Houston, Texas (GIH)
G
59%
A
41%
G/G
35%
A
/G
48%
A/A
17%
Japanese in Tokyo, Japan (JPT)
G
54%
A
47%
G/G
28%
A
/G
51%
A/A
21%
Luhya in Webuye, Kenya (LWK)
G
82%
A
18%
G/G
68%
A
/G
29%
A/A
3%
Mexican ancestry in Los Angeles, California (MEX)
G
60%
A
40%
G/G
35%
A
/G
51%
A/A
14%
Maasai in Kinyawa, Kenya (MKK)
G
65%
A
35%
G/G
43%
A
/G
45%
A/A
13%
Toscans in Italy (TSI)
G
53%
A
47%
G/G
31%
A
/G
44%
A/A
25%
Yoruba in Ibadan, Nigeria (YRI)
G
85%
A
15%
G/G
72%
A
/G
27%
A/A
2%
Global or other
G
60%
A
40%
SNPs correlated to rs3784307;jsessionid=9083715B9F2B56868F8C6856137429EC for population
Global
African ancestry in Southwest, USA
Chinese in Metropolitan Denver, Colorado
Gujarati Indians in Houston, Texas
Han Chinese in Beijing, China
Japanese in Tokyo, Japan
Luhya in Webuye, Kenya
Maasai in Kinyawa, Kenya
Mexican ancestry in Los Angeles, California
Toscans in Italy
Utah residents with Northern and Western European ancestry
Yoruba in Ibadan, Nigeria
Clear Filter
SNP
r
2
Maximum Recombination Rate
Distance (bp)
Genetic Distance (cM)
rs4774583
0.925
0.1298
641.0
1.0E-4
rs8034835
0.893
0.4086
6030.0
0.0015
rs6493489
0.887
0.4086
7569.0
0.0017
rs2289105
0.886
0.1192
874.0
1.0E-4
rs2304463
0.886
0.4086
1486.0
2.0E-4
rs4324076
0.792
0.4086
4234.0
0.0013
rs8023263
0.753
0.6616
10963.0
0.0029
rs8029120
0.738
1.0375
1700.0
0.0012
rs1065779
0.738
1.0375
1823.0
0.0012
rs7167936
0.692
4.6128
7089.0
0.0041
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